List of 1st BASE DNA Sequencing Services
Product No. | Name of Service | Service Requirements | Turnaround Time |
DNA Sequencing Services | |||
SS1001 | Single Pass DNA Sequencing | Customer to provide purified DNA templates in tubes. Charge per reaction. 1 reaction = 1 DNA template sequenced with 1 sequencing primer. | 1-2 working days |
SS1002 | High Throughput (HT) DNA Sequencing | Sample sent in 96-well plate. Leave well H12 empty for our control reaction. Charge per reaction. 1 reaction = 1 DNA template sequenced with 1 sequencing primer with minimum 80 reactions per order. | 2-3 working days |
SS1006 | Difficult Template Sequencing (DTS) | Surcharge for difficult DNA templates with 70% GC-rich/ 70% AT-rich/ GT-rich/ repetitive sequences/ secondary structure. Surcharge per reaction. 1 reaction = 1 difficult DNA template sequenced with 1 sequencing primer. | 2-3 working days |
SS1201 | DNA Sequencing Service + Plus | Customer to provide unpurified DNA Templates in the listed terms and conditions. This service is not applicable for difficult templates and not available for HT DNA sequencing. Charge per reaction. 1 reaction = 1 DNA template sequenced with 1 sequencing primer. | 2-3 working days |
SS1301 | Direct Colony Sequencing (DCS) | Customer to provide visible single colony (1mm x 6 mm) in slant agar. Suitable for high copy plasmid DNA to eliminate the need of plasmid extraction/ rolling circle amplification before DNA sequencing. Charge per reaction. 1 reaction = 1 single colony sequenced with 1 sequencing primer. | 1-2 working days |
SS1101 | M13-Tailed Sequencing | Customer to provide unpurified qPCR/ PCR products, primer sequences and reference sequence for each product to tabulate the variant/ mutation. Charge per DNA template. | PCR optimization setup: 1 to 2 weeks. Sequencing: 2-3 working days |
SS1005 | Ready-to-Load Sequencing | We accept purified reactions done using Applied Biosystem BigDye® v3.1. Charge per loading. 1 load = 1 cycle sequencing product | 1 working day |
SS1019 | Ready-to-load Sequencing with Clean-up | Customer to provide us with pre-cycled BigDye® sequencing reaction. We will perform the post-cycle sequencing clean-up to remove un-incorporated dyes before loading on our Genetic Analyzer.
Charge per loading. 1 load = 1 cycle sequencing product | 1 to 2 working days |
SS1008 | Primer Walking of Constructs Service - Single Pass. | Sequencing runs bi-directionally until a length of overlapping sequences is obtained. Customer to provide vector name and RE cut sites (where applicable) for data alignment. Service inclusive design of internal sequencing primer, primer synthesis, DNA sequencing and data alignment. Charge per base of data, applied only for cloned DNA fragment. | 1kb per week |
SS1009 | Primer Walking of Constructs Service - Bi-Directional. | Sequencing runs bi-directionally until the end of insert. Customer to provide vector name and RE cut sites (if applicable) for data alignment. Service inclusive design of internal sequencing primer, primer synthesis, DNA sequencing and data alignment. Charge per bp of data, applied only for cloned DNA fragment. | 1kb per week |
Sample Preparation and Quantification Service | |||
SS1012 | DNA Sequencing Sample Preparation - PCR Clean-up | This service is recommended for customer that wants to purify their DNA template before subsequent decision of more sequencing services from the same DNA template. PCR clean-up recovers all dsDNA and removes the excess PCR reagents and PCR primers. Hence, it is recommended for single band-product.
Charge per DNA template. | 1-2 working days |
SS1014 | DNA Sequencing Sample Preparation - Gel Extraction by General Agarose | When there are multiple DNA bands from the single DNA template, gel extraction is required to eliminate the non-target dsDNA. Customer to indicate the specific fragment size to be excised.
Charge for each fragment extraction.
| 1-2 working days |
SS1017 | DNA Sequencing Sample Preparation - Plasmid Extraction | Customer to provide colony plate prepared from single colony, vector name, antibiotic resistant and concentration of antibiotic. Fresh colony plate (not more than 2 weeks) or fresh broth (not more than 1 month) is recommended.
Charge for each plasmid extraction.
| 2-3 working days |
SS1020 | DNA Sequencing Sample Quantification - By Agarose Gel | This service allows customers to skip the hassle of gel electrophoresis to estimate DNA purity and concentration of DNA template before sequencing.
Charge per DNA template.
| 1 working day |
SS1021 | DNA Sequencing Sample Quantification - Spectrophotometer Reading | This service determines DNA template concentration and purity using ratio of 260/280 before sequencing.
Charge per DNA template. | 1 working day |
SS1036 | DNA Sequencing Sample Preparation Service - Drying of Ready-to-Load Samples. | This service is available for the customers who are not able to dry their purified BigDye® cycle sequencing reactions completely.
Charge per reaction. | 1 working day |
SS1047 | DNA Sequencing Sample Preparation Service | This service is recommended for DNA template (e.g. plasmid DNA or gDNA) that shows heavy RNA contamination. Right after RNase treatment, the DNA template will be ethanol precipitated and purified before DNA sequencing.
Charge per DNA template. | 1-2 working days |
DNA Sequencing Custom Services | |||
SS1024 | DNA Sequencing Service - Publication Quality | We run the reactions twice to generate 2 different sequencing traces from the same DNA template and its sequencing primer(s).
Discounted price applies to the duplicate reaction. | 1 working day |
Expedite Service - Pickup | Pick-up Charge for Expedite Service. | Our Expedite DNA Sequencing Service is only available in selected locations. Please enquire if your location is covered.
One-time charge per order. | Request through 1oo before 9am, sample ready for pick-up before 11am. T&C apply. |
Seq Expedite Service-SP | DNA Sequencing Expedite Service, Single Pass Sequencing. | Our Expedited Single Pass Sequencing Service is only available in selected locations. It is limited to maximum 95 reactions per order and only available through our online ordering system (1oo). Not applicable for DNA template(s) require any add-on services, e.g. purification or quantification services before sequencing.
Charge per reaction. | Same day, before 6pm. |
Seq Expedite Service-RTL | DNA Sequencing Expedite Service, Ready-to-load Sequencing. | Our Expedited Ready-to-load Sequencing Service is only available in selected locations. It is limited to maximum 95 loadings per order and only available through our online ordering system (1oo). Not applicable for RTL reaction(s) require add-on services, e.g. clean-up before sequencing.
Charge per loading. 1 load = 1 cycle sequencing product. | Same day, before 6pm. |
DNA Sequencing Design and Analysis Services | |||
SS1026 | DNA Sequencing Analysis - BLAST | Blast-N (nucleotides) from NCBI | 1 working day |
SS1027 | DNA Sequencing Analysis - Data Alignment with 2 sequences | 1 alignment data is generated from 2 DNA sequencing results (usually forward and reverse sequencing). | 1 working day |
SS1028 | DNA Sequencing Analysis - Data Alignment with 3 sequences | 1 alignment data is generated from 3 DNA sequencing results (usually forward, reverse & internal sequencing). | 1 working day |
SS1029 | DNA Sequencing Primer Design and Synthesis (Single primer) | The sequencing primer is designed from 1 sequencing result. It usually applies for 1 directional sequencing, for the fragment size > 1.5 kb. | 3-4 working days |
SS1030 | DNA Sequencing Primer Design and Synthesis (Forward and Reverse primer) | The sequencing primers are designed from 2 sequencing results. It usually applies to bi-directional sequencing, for the fragment size > 3.0 kb. | 3-4 working days |
SS1042 | DNA Sequencing Service - Dendrogram. Price per submission. | 1 dendrogram will be created using the sequencing traces from .ab1 files. | 1 working day |
SS1043 | DNA Sequencing Service - Dendrogram with previous data. Price per submission. | Customer to provide other DNA sequences to be included in this analysis. 1 dendrogram will be created using the sequencing traces from .ab1 files together with the additional DNA sequences provided by customer. | 1 working day |
Other Add-on Services | |||
SS1034 | Storage of Sequencing Primer | All provided sequencing primers will be discarded after 1 week from the completed order. A nominal charge applies if you need us to keep them in our laboratory.
Charge per 2 months for each tube. | 2 months |
SS1038 | Storage of DNA Template | All provided DNA Templates will be discarded after 1 week from the completed order. A nominal charge applies if you need us to keep them in our laboratory.
Charge per 2 months for each tube. | 2 months |